Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Gm8749-201ENSMUST00000117737 331 ntBASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Gm12895-201ENSMUST00000122214 226 ntBASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Lysmd4Q8CC84 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.15□□□□□ -0.31
Lysmd4Q8CC84 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lysmd4Q8CC84 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lysmd4Q8CC84 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd4Q8CC84 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms