Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp20Q8C6M1 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.22■□□□□ 0.19
Usp20Q8C6M1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp20Q8C6M1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Usp20Q8C6M1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Usp20Q8C6M1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp20Q8C6M1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp20Q8C6M1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp20Q8C6M1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp20Q8C6M1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp20Q8C6M1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp20Q8C6M1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Gm13823-201ENSMUST00000119930 345 ntBASIC16.21■□□□□ 0.19
Usp20Q8C6M1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Usp20Q8C6M1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp20Q8C6M1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp20Q8C6M1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.21■□□□□ 0.18
Usp20Q8C6M1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp20Q8C6M1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp20Q8C6M1 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Gm5479-201ENSMUST00000160578 435 ntBASIC16.2■□□□□ 0.18
Usp20Q8C6M1 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Sybu-209ENSMUST00000228639 4113 ntBASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp20Q8C6M1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Gm9063-201ENSMUST00000223299 582 ntBASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Usp20Q8C6M1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp20Q8C6M1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms