Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm5354-201ENSMUST00000182417 973 ntBASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Gm13216-201ENSMUST00000117145 591 ntBASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Gm5035-201ENSMUST00000215581 927 ntBASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Gm9002-201ENSMUST00000178437 499 ntBASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.19□□□□□ -0.3
Col6a6Q8C6K9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Gm27701-201ENSMUST00000184498 110 ntBASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms