Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm44335-201ENSMUST00000196879 141 ntBASIC18.7■□□□□ 0.58
Ccdc60Q8C4J0 Gm44297-201ENSMUST00000198304 141 ntBASIC18.7■□□□□ 0.58
Ccdc60Q8C4J0 Gm44346-201ENSMUST00000198851 141 ntBASIC18.7■□□□□ 0.58
Ccdc60Q8C4J0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc60Q8C4J0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc60Q8C4J0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc60Q8C4J0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc60Q8C4J0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc60Q8C4J0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc60Q8C4J0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Ccdc60Q8C4J0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc60Q8C4J0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc60Q8C4J0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc60Q8C4J0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc60Q8C4J0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.7■□□□□ 0.58
Ccdc60Q8C4J0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Gm45098-201ENSMUST00000207179 657 ntBASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc60Q8C4J0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Gm2810-201ENSMUST00000118681 990 ntBASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Mir6990-201ENSMUST00000183724 91 ntBASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc60Q8C4J0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc60Q8C4J0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Gm37230-201ENSMUST00000194491 818 ntBASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms