Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam43aQ8BUP8 Gm10728-201ENSMUST00000194292 1829 ntBASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Gm11780-201ENSMUST00000136880 516 ntBASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Gm6376-201ENSMUST00000209407 580 ntBASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Fam43aQ8BUP8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Gm4535-201ENSMUST00000182274 558 ntBASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Mir8098-201ENSMUST00000184011 137 ntBASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Gm10355-201ENSMUST00000097146 517 ntBASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Fam43aQ8BUP8 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fam43aQ8BUP8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Fam43aQ8BUP8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fam43aQ8BUP8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Fam43aQ8BUP8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fam43aQ8BUP8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Fam43aQ8BUP8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Fam43aQ8BUP8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fam43aQ8BUP8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms