Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.92■□□□□ 0.3
Prpf40bQ80W14 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Gm6912-201ENSMUST00000117218 544 ntBASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40bQ80W14 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40bQ80W14 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Prpf40bQ80W14 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Prpf40bQ80W14 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Prpf40bQ80W14 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Prpf40bQ80W14 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Gm14767-201ENSMUST00000121559 586 ntBASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Gm27838-201ENSMUST00000184829 128 ntBASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms