Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Gm9385-201ENSMUST00000117563 472 ntBASIC14.28□□□□□ -0.12
Scn4bQ7M729 Gm8749-201ENSMUST00000117737 331 ntBASIC14.28□□□□□ -0.12
Scn4bQ7M729 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Gm45747-201ENSMUST00000212203 999 ntBASIC14.28□□□□□ -0.12
Scn4bQ7M729 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.28□□□□□ -0.12
Scn4bQ7M729 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn4bQ7M729 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn4bQ7M729 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn4bQ7M729 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn4bQ7M729 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Scn4bQ7M729 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn4bQ7M729 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn4bQ7M729 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Scn4bQ7M729 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn4bQ7M729 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn4bQ7M729 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn4bQ7M729 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Scn4bQ7M729 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.27□□□□□ -0.13
Scn4bQ7M729 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.27□□□□□ -0.13
Scn4bQ7M729 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.27□□□□□ -0.13
Scn4bQ7M729 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scn4bQ7M729 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn4bQ7M729 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.26□□□□□ -0.13
Scn4bQ7M729 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms