Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.53■□□□□ 0.4
Npc1l1Q6T3U4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Gm27680-201ENSMUST00000184192 160 ntBASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Gm43438-201ENSMUST00000198133 379 ntBASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npc1l1Q6T3U4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Npc1l1Q6T3U4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Npc1l1Q6T3U4 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.52■□□□□ 0.39
Npc1l1Q6T3U4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Npc1l1Q6T3U4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Npc1l1Q6T3U4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Npc1l1Q6T3U4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Npc1l1Q6T3U4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Gm13823-201ENSMUST00000119930 345 ntBASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1l1Q6T3U4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Gm9063-201ENSMUST00000223299 582 ntBASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Sybu-209ENSMUST00000228639 4113 ntBASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1l1Q6T3U4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms