Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm21880-201ENSMUST00000187275 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm21826-201ENSMUST00000187451 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm21198-201ENSMUST00000188393 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm21749-201ENSMUST00000189343 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm21901-201ENSMUST00000189568 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm29424-201ENSMUST00000189716 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm28599-201ENSMUST00000189838 694 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm21867-201ENSMUST00000189917 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm29269-201ENSMUST00000190087 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm21722-201ENSMUST00000190153 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm28423-201ENSMUST00000190701 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm21899-201ENSMUST00000190745 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm21910-201ENSMUST00000191163 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm21849-201ENSMUST00000191571 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm28678-201ENSMUST00000191593 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm20910-201ENSMUST00000193268 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm21871-201ENSMUST00000194621 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Clcn1Q64347 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Clcn1Q64347 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn1Q64347 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.52■□□□□ 0.55
Clcn1Q64347 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clcn1Q64347 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Clcn1Q64347 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clcn1Q64347 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.52■□□□□ 0.55
Clcn1Q64347 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Clcn1Q64347 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clcn1Q64347 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clcn1Q64347 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Clcn1Q64347 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Clcn1Q64347 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.51■□□□□ 0.55
Clcn1Q64347 Gm14042-201ENSMUST00000120139 833 ntBASIC18.51■□□□□ 0.55
Clcn1Q64347 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.51■□□□□ 0.55
Clcn1Q64347 Gm42612-201ENSMUST00000197986 623 ntBASIC18.51■□□□□ 0.55
Clcn1Q64347 Gm43170-201ENSMUST00000199827 612 ntBASIC18.51■□□□□ 0.55
Clcn1Q64347 Gm16476-201ENSMUST00000221544 139 ntBASIC18.51■□□□□ 0.55
Clcn1Q64347 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.51■□□□□ 0.55
Clcn1Q64347 Dupd1-202ENSMUST00000224735 548 ntBASIC18.51■□□□□ 0.55
Clcn1Q64347 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn1Q64347 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Clcn1Q64347 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Clcn1Q64347 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Clcn1Q64347 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC18.5■□□□□ 0.55
Clcn1Q64347 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.5■□□□□ 0.55
Clcn1Q64347 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Gm27631-201ENSMUST00000184163 466 ntBASIC18.5■□□□□ 0.55
Clcn1Q64347 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.5■□□□□ 0.55
Clcn1Q64347 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Gm6180-201ENSMUST00000065243 498 ntBASIC18.5■□□□□ 0.55
Clcn1Q64347 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Clcn1Q64347 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.5■□□□□ 0.55
Clcn1Q64347 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn1Q64347 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn1Q64347 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn1Q64347 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn1Q64347 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.49■□□□□ 0.55
Clcn1Q64347 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn1Q64347 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms