Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav8d-1Q5R1H8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Gm27459-201ENSMUST00000184860 107 ntBASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Gm28659-201ENSMUST00000188013 759 ntBASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8d-1Q5R1H8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8d-1Q5R1H8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8d-1Q5R1H8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8d-1Q5R1H8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8d-1Q5R1H8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8d-1Q5R1H8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8d-1Q5R1H8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.02□□□□□ -0.48
Trav8d-1Q5R1H8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8d-1Q5R1H8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav8d-1Q5R1H8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav8d-1Q5R1H8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8d-1Q5R1H8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8d-1Q5R1H8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8d-1Q5R1H8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav8d-1Q5R1H8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Mir8098-201ENSMUST00000184011 137 ntBASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms