Protein–RNA interactions for Protein: Q3TZA2

Cdkl4, Cyclin-dependent kinase-like 4, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl4Q3TZA2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkl4Q3TZA2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkl4Q3TZA2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkl4Q3TZA2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkl4Q3TZA2 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.68□□□□□ -0.06
Cdkl4Q3TZA2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkl4Q3TZA2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Gm13616-201ENSMUST00000120600 222 ntBASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Gm24158-201ENSMUST00000175263 71 ntBASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Cdkl4Q3TZA2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Gm13464-201ENSMUST00000119418 935 ntBASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Gm7774-201ENSMUST00000200064 533 ntBASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.66□□□□□ -0.06
Cdkl4Q3TZA2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdkl4Q3TZA2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms