Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Gm15467-201ENSMUST00000120582 445 ntBASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Gm25911-201ENSMUST00000157621 56 ntBASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.93■□□□□ 0.3
Ctdnep1Q3TP92 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Ctdnep1Q3TP92 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ctdnep1Q3TP92 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctdnep1Q3TP92 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctdnep1Q3TP92 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctdnep1Q3TP92 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctdnep1Q3TP92 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctdnep1Q3TP92 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctdnep1Q3TP92 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.91■□□□□ 0.3
Ctdnep1Q3TP92 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ctdnep1Q3TP92 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctdnep1Q3TP92 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctdnep1Q3TP92 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctdnep1Q3TP92 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctdnep1Q3TP92 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctdnep1Q3TP92 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctdnep1Q3TP92 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Gm6973-201ENSMUST00000117080 721 ntBASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Gm27920-201ENSMUST00000183953 96 ntBASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Gm45098-201ENSMUST00000207179 657 ntBASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ctdnep1Q3TP92 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ctdnep1Q3TP92 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ctdnep1Q3TP92 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ctdnep1Q3TP92 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ctdnep1Q3TP92 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ctdnep1Q3TP92 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ctdnep1Q3TP92 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ctdnep1Q3TP92 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ctdnep1Q3TP92 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ctdnep1Q3TP92 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms