Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.1□□□□□ -0.47
Trim63Q38HM4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.1□□□□□ -0.47
Trim63Q38HM4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.1□□□□□ -0.47
Trim63Q38HM4 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.1□□□□□ -0.47
Trim63Q38HM4 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.1□□□□□ -0.47
Trim63Q38HM4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim63Q38HM4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trim63Q38HM4 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim63Q38HM4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim63Q38HM4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim63Q38HM4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim63Q38HM4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim63Q38HM4 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.08□□□□□ -0.47
Trim63Q38HM4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim63Q38HM4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.08□□□□□ -0.48
Trim63Q38HM4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trim63Q38HM4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms