Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs3Q05895 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs3Q05895 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.88□□□□□ -0.35
Thbs3Q05895 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Thbs3Q05895 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs3Q05895 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.88□□□□□ -0.35
Thbs3Q05895 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs3Q05895 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs3Q05895 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs3Q05895 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs3Q05895 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.88□□□□□ -0.35
Thbs3Q05895 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Thbs3Q05895 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs3Q05895 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs3Q05895 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs3Q05895 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs3Q05895 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs3Q05895 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs3Q05895 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs3Q05895 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs3Q05895 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.87□□□□□ -0.35
Thbs3Q05895 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.87□□□□□ -0.35
Thbs3Q05895 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Thbs3Q05895 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs3Q05895 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs3Q05895 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs3Q05895 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.87□□□□□ -0.35
Thbs3Q05895 Gm11543-201ENSMUST00000120758 370 ntBASIC12.87□□□□□ -0.35
Thbs3Q05895 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Thbs3Q05895 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Thbs3Q05895 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Thbs3Q05895 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.87□□□□□ -0.35
Thbs3Q05895 Olfr286-202ENSMUST00000205305 969 ntBASIC12.87□□□□□ -0.35
Thbs3Q05895 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.87□□□□□ -0.35
Thbs3Q05895 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs3Q05895 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs3Q05895 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs3Q05895 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Thbs3Q05895 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs3Q05895 Carlr-201ENSMUST00000181515 2574 ntBASIC12.87□□□□□ -0.35
Thbs3Q05895 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs3Q05895 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs3Q05895 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Thbs3Q05895 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs3Q05895 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs3Q05895 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Thbs3Q05895 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Thbs3Q05895 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
Thbs3Q05895 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs3Q05895 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.86□□□□□ -0.35
Thbs3Q05895 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.86□□□□□ -0.35
Thbs3Q05895 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Thbs3Q05895 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.86□□□□□ -0.35
Thbs3Q05895 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Thbs3Q05895 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.86□□□□□ -0.35
Thbs3Q05895 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Gm6973-201ENSMUST00000117080 721 ntBASIC12.86□□□□□ -0.35
Thbs3Q05895 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.86□□□□□ -0.35
Thbs3Q05895 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.86□□□□□ -0.35
Thbs3Q05895 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.86□□□□□ -0.35
Thbs3Q05895 Gm15483-201ENSMUST00000120338 456 ntBASIC12.86□□□□□ -0.35
Thbs3Q05895 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.86□□□□□ -0.35
Thbs3Q05895 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.86□□□□□ -0.35
Thbs3Q05895 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.86□□□□□ -0.35
Thbs3Q05895 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.86□□□□□ -0.35
Thbs3Q05895 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Thbs3Q05895 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs3Q05895 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Thbs3Q05895 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.85□□□□□ -0.35
Thbs3Q05895 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Thbs3Q05895 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Thbs3Q05895 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms