Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gfra1P97785 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gfra1P97785 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gfra1P97785 Mir449b-201ENSMUST00000104833 80 ntBASIC12.13□□□□□ -0.47
Gfra1P97785 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gfra1P97785 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Gfra1P97785 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.13□□□□□ -0.47
Gfra1P97785 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.13□□□□□ -0.47
Gfra1P97785 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.13□□□□□ -0.47
Gfra1P97785 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.13□□□□□ -0.47
Gfra1P97785 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gfra1P97785 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gfra1P97785 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.13□□□□□ -0.47
Gfra1P97785 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.13□□□□□ -0.47
Gfra1P97785 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gfra1P97785 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gfra1P97785 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
Gfra1P97785 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gfra1P97785 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gfra1P97785 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gfra1P97785 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.13□□□□□ -0.47
Gfra1P97785 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gfra1P97785 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gfra1P97785 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Gfra1P97785 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gfra1P97785 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gfra1P97785 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gfra1P97785 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gfra1P97785 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Gfra1P97785 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gfra1P97785 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.12□□□□□ -0.47
Gfra1P97785 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.12□□□□□ -0.47
Gfra1P97785 Gm9824-201ENSMUST00000178707 561 ntBASIC12.12□□□□□ -0.47
Gfra1P97785 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Mir6956-201ENSMUST00000183598 62 ntBASIC12.12□□□□□ -0.47
Gfra1P97785 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.12□□□□□ -0.47
Gfra1P97785 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.12□□□□□ -0.47
Gfra1P97785 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gfra1P97785 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gfra1P97785 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.12□□□□□ -0.47
Gfra1P97785 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gfra1P97785 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gfra1P97785 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gfra1P97785 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.11□□□□□ -0.47
Gfra1P97785 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gfra1P97785 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.11□□□□□ -0.47
Gfra1P97785 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gfra1P97785 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Gfra1P97785 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.11□□□□□ -0.47
Gfra1P97785 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.11□□□□□ -0.47
Gfra1P97785 Gm27920-201ENSMUST00000183953 96 ntBASIC12.11□□□□□ -0.47
Gfra1P97785 Gm10576-201ENSMUST00000191927 825 ntBASIC12.11□□□□□ -0.47
Gfra1P97785 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.11□□□□□ -0.47
Gfra1P97785 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.11□□□□□ -0.47
Gfra1P97785 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Gfra1P97785 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gfra1P97785 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms