Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Surf6P70279 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.26■□□□□ 0.03
Surf6P70279 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Surf6P70279 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Surf6P70279 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.25■□□□□ 0.03
Surf6P70279 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
Surf6P70279 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.25■□□□□ 0.03
Surf6P70279 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.25■□□□□ 0.03
Surf6P70279 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Gm45328-201ENSMUST00000210942 917 ntBASIC15.25■□□□□ 0.03
Surf6P70279 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.25■□□□□ 0.03
Surf6P70279 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Surf6P70279 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Surf6P70279 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Surf6P70279 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Surf6P70279 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf6P70279 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf6P70279 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Surf6P70279 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf6P70279 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf6P70279 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf6P70279 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.24■□□□□ 0.03
Surf6P70279 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.24■□□□□ 0.03
Surf6P70279 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Surf6P70279 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Surf6P70279 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Surf6P70279 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf6P70279 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.24■□□□□ 0.03
Surf6P70279 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf6P70279 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Surf6P70279 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf6P70279 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf6P70279 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Surf6P70279 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf6P70279 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf6P70279 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Surf6P70279 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Surf6P70279 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.24■□□□□ 0.03
Surf6P70279 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Surf6P70279 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Surf6P70279 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Surf6P70279 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Surf6P70279 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.23■□□□□ 0.03
Surf6P70279 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Surf6P70279 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Surf6P70279 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Surf6P70279 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Surf6P70279 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Surf6P70279 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.23■□□□□ 0.03
Surf6P70279 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Surf6P70279 Gm25406-201ENSMUST00000157599 105 ntBASIC15.23■□□□□ 0.03
Surf6P70279 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.23■□□□□ 0.03
Surf6P70279 Gm18669-201ENSMUST00000216049 778 ntBASIC15.23■□□□□ 0.03
Surf6P70279 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.23■□□□□ 0.03
Surf6P70279 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Surf6P70279 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Surf6P70279 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Surf6P70279 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Surf6P70279 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Surf6P70279 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Surf6P70279 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Surf6P70279 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.23■□□□□ 0.03
Surf6P70279 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.22■□□□□ 0.03
Surf6P70279 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Surf6P70279 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Surf6P70279 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Surf6P70279 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Surf6P70279 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Surf6P70279 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.22■□□□□ 0.03
Surf6P70279 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Surf6P70279 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Surf6P70279 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Surf6P70279 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Surf6P70279 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Surf6P70279 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Surf6P70279 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.22■□□□□ 0.03
Surf6P70279 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Surf6P70279 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms