Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Uba52P62984 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.77□□□□□ -0.36
Uba52P62984 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Uba52P62984 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Uba52P62984 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Uba52P62984 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.77□□□□□ -0.37
Uba52P62984 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.77□□□□□ -0.37
Uba52P62984 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Uba52P62984 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Uba52P62984 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Uba52P62984 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.77□□□□□ -0.37
Uba52P62984 Gm6550-201ENSMUST00000187574 993 ntBASIC12.77□□□□□ -0.37
Uba52P62984 Gm2756-201ENSMUST00000195851 400 ntBASIC12.77□□□□□ -0.37
Uba52P62984 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Uba52P62984 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Uba52P62984 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Uba52P62984 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Uba52P62984 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.77□□□□□ -0.37
Uba52P62984 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Uba52P62984 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Uba52P62984 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Uba52P62984 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.76□□□□□ -0.37
Uba52P62984 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Uba52P62984 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Uba52P62984 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Uba52P62984 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Uba52P62984 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.76□□□□□ -0.37
Uba52P62984 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.76□□□□□ -0.37
Uba52P62984 Gm8097-201ENSMUST00000117903 829 ntBASIC12.76□□□□□ -0.37
Uba52P62984 Gm43575-201ENSMUST00000196420 516 ntBASIC12.76□□□□□ -0.37
Uba52P62984 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.76□□□□□ -0.37
Uba52P62984 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.76□□□□□ -0.37
Uba52P62984 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Uba52P62984 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Uba52P62984 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Uba52P62984 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.76□□□□□ -0.37
Uba52P62984 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Uba52P62984 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Uba52P62984 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Uba52P62984 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Uba52P62984 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Uba52P62984 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms