Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sssca1P56873 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.88□□□□□ -0.51
Sssca1P56873 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.88□□□□□ -0.51
Sssca1P56873 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sssca1P56873 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.87□□□□□ -0.51
Sssca1P56873 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sssca1P56873 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Sssca1P56873 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.87□□□□□ -0.51
Sssca1P56873 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.87□□□□□ -0.51
Sssca1P56873 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.87□□□□□ -0.51
Sssca1P56873 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.87□□□□□ -0.51
Sssca1P56873 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.87□□□□□ -0.51
Sssca1P56873 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.87□□□□□ -0.51
Sssca1P56873 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sssca1P56873 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sssca1P56873 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Sssca1P56873 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.86□□□□□ -0.51
Sssca1P56873 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.86□□□□□ -0.51
Sssca1P56873 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.86□□□□□ -0.51
Sssca1P56873 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.86□□□□□ -0.51
Sssca1P56873 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.86□□□□□ -0.51
Sssca1P56873 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sssca1P56873 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.86□□□□□ -0.51
Sssca1P56873 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.86□□□□□ -0.51
Sssca1P56873 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sssca1P56873 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.86□□□□□ -0.51
Sssca1P56873 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sssca1P56873 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.86□□□□□ -0.51
Sssca1P56873 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sssca1P56873 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sssca1P56873 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.85□□□□□ -0.51
Sssca1P56873 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sssca1P56873 Gm18489-201ENSMUST00000172565 551 ntBASIC11.85□□□□□ -0.51
Sssca1P56873 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.85□□□□□ -0.51
Sssca1P56873 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.85□□□□□ -0.51
Sssca1P56873 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms