Protein–RNA interactions for Protein: P52483

Ube2e3, Ubiquitin-conjugating enzyme E2 E3, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2e3P52483 Gm17968-201ENSMUST00000194902 784 ntBASIC14.06□□□□□ -0.16
Ube2e3P52483 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube2e3P52483 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.06□□□□□ -0.16
Ube2e3P52483 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube2e3P52483 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ube2e3P52483 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube2e3P52483 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ube2e3P52483 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube2e3P52483 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Ube2e3P52483 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Ube2e3P52483 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube2e3P52483 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube2e3P52483 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube2e3P52483 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Ube2e3P52483 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube2e3P52483 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube2e3P52483 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube2e3P52483 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube2e3P52483 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ube2e3P52483 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube2e3P52483 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ube2e3P52483 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ube2e3P52483 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ube2e3P52483 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.05□□□□□ -0.16
Ube2e3P52483 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.05□□□□□ -0.16
Ube2e3P52483 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ube2e3P52483 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ube2e3P52483 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.05□□□□□ -0.16
Ube2e3P52483 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Gm15467-201ENSMUST00000120582 445 ntBASIC14.05□□□□□ -0.16
Ube2e3P52483 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.05□□□□□ -0.16
Ube2e3P52483 Gm44492-201ENSMUST00000197012 141 ntBASIC14.05□□□□□ -0.16
Ube2e3P52483 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ube2e3P52483 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Ube2e3P52483 Carlr-201ENSMUST00000181515 2574 ntBASIC14.05□□□□□ -0.16
Ube2e3P52483 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.05□□□□□ -0.16
Ube2e3P52483 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.05□□□□□ -0.16
Ube2e3P52483 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.05□□□□□ -0.16
Ube2e3P52483 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ube2e3P52483 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.04□□□□□ -0.16
Ube2e3P52483 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ube2e3P52483 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ube2e3P52483 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ube2e3P52483 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Ube2e3P52483 Gm15427-201ENSMUST00000117288 531 ntBASIC14.04□□□□□ -0.16
Ube2e3P52483 Gm9385-201ENSMUST00000117563 472 ntBASIC14.04□□□□□ -0.16
Ube2e3P52483 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ube2e3P52483 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.04□□□□□ -0.16
Ube2e3P52483 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.04□□□□□ -0.16
Ube2e3P52483 Gm2451-201ENSMUST00000199447 999 ntBASIC14.04□□□□□ -0.16
Ube2e3P52483 Gm10290-201ENSMUST00000200451 999 ntBASIC14.04□□□□□ -0.16
Ube2e3P52483 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.04□□□□□ -0.16
Ube2e3P52483 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ube2e3P52483 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ube2e3P52483 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.04□□□□□ -0.16
Ube2e3P52483 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube2e3P52483 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms