Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc2P43407 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc2P43407 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc2P43407 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc2P43407 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.46■□□□□ 0.23
Sdc2P43407 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc2P43407 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.46■□□□□ 0.23
Sdc2P43407 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc2P43407 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.46■□□□□ 0.23
Sdc2P43407 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.46■□□□□ 0.23
Sdc2P43407 Gm15590-201ENSMUST00000078419 552 ntBASIC16.46■□□□□ 0.23
Sdc2P43407 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sdc2P43407 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc2P43407 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.46■□□□□ 0.23
Sdc2P43407 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc2P43407 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc2P43407 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc2P43407 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sdc2P43407 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sdc2P43407 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.45■□□□□ 0.22
Sdc2P43407 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.45■□□□□ 0.22
Sdc2P43407 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.45■□□□□ 0.22
Sdc2P43407 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.45■□□□□ 0.22
Sdc2P43407 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.45■□□□□ 0.22
Sdc2P43407 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.45■□□□□ 0.22
Sdc2P43407 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.45■□□□□ 0.22
Sdc2P43407 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.45■□□□□ 0.22
Sdc2P43407 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.45■□□□□ 0.22
Sdc2P43407 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.45■□□□□ 0.22
Sdc2P43407 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.45■□□□□ 0.22
Sdc2P43407 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.45■□□□□ 0.22
Sdc2P43407 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.45■□□□□ 0.22
Sdc2P43407 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdc2P43407 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Sdc2P43407 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.44■□□□□ 0.22
Sdc2P43407 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.44■□□□□ 0.22
Sdc2P43407 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sdc2P43407 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.44■□□□□ 0.22
Sdc2P43407 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.44■□□□□ 0.22
Sdc2P43407 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.44■□□□□ 0.22
Sdc2P43407 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sdc2P43407 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdc2P43407 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.43■□□□□ 0.22
Sdc2P43407 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sdc2P43407 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Sdc2P43407 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.43■□□□□ 0.22
Sdc2P43407 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms