Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.03■□□□□ 0.16
Sox5P35710 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sox5P35710 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.03■□□□□ 0.16
Sox5P35710 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.03■□□□□ 0.16
Sox5P35710 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox5P35710 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Sox5P35710 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Sox5P35710 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox5P35710 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox5P35710 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox5P35710 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox5P35710 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox5P35710 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox5P35710 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox5P35710 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Sox5P35710 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.02■□□□□ 0.16
Sox5P35710 Gm13464-201ENSMUST00000119418 935 ntBASIC16.02■□□□□ 0.16
Sox5P35710 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox5P35710 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.02■□□□□ 0.16
Sox5P35710 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.02■□□□□ 0.16
Sox5P35710 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.02■□□□□ 0.15
Sox5P35710 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox5P35710 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox5P35710 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sox5P35710 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox5P35710 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox5P35710 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox5P35710 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox5P35710 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sox5P35710 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.01■□□□□ 0.15
Sox5P35710 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.01■□□□□ 0.15
Sox5P35710 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.01■□□□□ 0.15
Sox5P35710 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.01■□□□□ 0.15
Sox5P35710 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.01■□□□□ 0.15
Sox5P35710 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox5P35710 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Sox5P35710 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.01■□□□□ 0.15
Sox5P35710 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sox5P35710 Rps4l-201ENSMUST00000071745 943 ntBASIC16.01■□□□□ 0.15
Sox5P35710 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox5P35710 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox5P35710 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox5P35710 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox5P35710 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox5P35710 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Sox5P35710 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox5P35710 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.01■□□□□ 0.15
Sox5P35710 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox5P35710 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox5P35710 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox5P35710 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox5P35710 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox5P35710 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sox5P35710 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox5P35710 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox5P35710 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox5P35710 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox5P35710 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16■□□□□ 0.15
Sox5P35710 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox5P35710 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox5P35710 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Sox5P35710 Gm42471-201ENSMUST00000201457 1865 ntBASIC16■□□□□ 0.15
Sox5P35710 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox5P35710 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16■□□□□ 0.15
Sox5P35710 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox5P35710 AC155729.1-201ENSMUST00000227758 544 ntBASIC16■□□□□ 0.15
Sox5P35710 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox5P35710 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox5P35710 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox5P35710 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox5P35710 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Sox5P35710 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox5P35710 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox5P35710 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox5P35710 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox5P35710 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Sox5P35710 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox5P35710 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms