Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VtnP29788 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
VtnP29788 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VtnP29788 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VtnP29788 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
VtnP29788 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
VtnP29788 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VtnP29788 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VtnP29788 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VtnP29788 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VtnP29788 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VtnP29788 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VtnP29788 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VtnP29788 Mir6956-201ENSMUST00000183598 62 ntBASIC13.29□□□□□ -0.28
VtnP29788 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.29□□□□□ -0.28
VtnP29788 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VtnP29788 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
VtnP29788 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
VtnP29788 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VtnP29788 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VtnP29788 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VtnP29788 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.29□□□□□ -0.28
VtnP29788 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VtnP29788 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
VtnP29788 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
VtnP29788 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VtnP29788 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VtnP29788 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VtnP29788 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
VtnP29788 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.28□□□□□ -0.28
VtnP29788 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.28□□□□□ -0.28
VtnP29788 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.28□□□□□ -0.28
VtnP29788 Gm13616-201ENSMUST00000120600 222 ntBASIC13.28□□□□□ -0.28
VtnP29788 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.28□□□□□ -0.28
VtnP29788 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.28□□□□□ -0.28
VtnP29788 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.28□□□□□ -0.28
VtnP29788 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.28□□□□□ -0.28
VtnP29788 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.28□□□□□ -0.28
VtnP29788 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
VtnP29788 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
VtnP29788 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
VtnP29788 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VtnP29788 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VtnP29788 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VtnP29788 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
VtnP29788 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VtnP29788 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
VtnP29788 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.27□□□□□ -0.28
VtnP29788 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
VtnP29788 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VtnP29788 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.27□□□□□ -0.29
VtnP29788 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
VtnP29788 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VtnP29788 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.27□□□□□ -0.29
VtnP29788 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.27□□□□□ -0.29
VtnP29788 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.27□□□□□ -0.29
VtnP29788 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
VtnP29788 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VtnP29788 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.27□□□□□ -0.29
VtnP29788 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.27□□□□□ -0.29
VtnP29788 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VtnP29788 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VtnP29788 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
VtnP29788 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VtnP29788 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
VtnP29788 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VtnP29788 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.27□□□□□ -0.29
VtnP29788 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.27□□□□□ -0.29
VtnP29788 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VtnP29788 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.27□□□□□ -0.29
VtnP29788 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VtnP29788 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms