Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.47□□□□□ -0.09
Pdlim1O70400 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.47□□□□□ -0.09
Pdlim1O70400 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.47□□□□□ -0.09
Pdlim1O70400 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pdlim1O70400 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Pdlim1O70400 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Pdlim1O70400 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Pdlim1O70400 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.47□□□□□ -0.09
Pdlim1O70400 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.47□□□□□ -0.09
Pdlim1O70400 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.47□□□□□ -0.09
Pdlim1O70400 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.47□□□□□ -0.09
Pdlim1O70400 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pdlim1O70400 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pdlim1O70400 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pdlim1O70400 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.47□□□□□ -0.09
Pdlim1O70400 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pdlim1O70400 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.47□□□□□ -0.09
Pdlim1O70400 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pdlim1O70400 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim1O70400 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.46□□□□□ -0.09
Pdlim1O70400 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.46□□□□□ -0.09
Pdlim1O70400 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.46□□□□□ -0.09
Pdlim1O70400 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.46□□□□□ -0.09
Pdlim1O70400 Gm44335-201ENSMUST00000196879 141 ntBASIC14.46□□□□□ -0.09
Pdlim1O70400 Gm44297-201ENSMUST00000198304 141 ntBASIC14.46□□□□□ -0.09
Pdlim1O70400 Gm44346-201ENSMUST00000198851 141 ntBASIC14.46□□□□□ -0.09
Pdlim1O70400 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Pdlim1O70400 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim1O70400 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim1O70400 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim1O70400 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim1O70400 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pdlim1O70400 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim1O70400 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim1O70400 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim1O70400 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim1O70400 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pdlim1O70400 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim1O70400 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim1O70400 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim1O70400 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim1O70400 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim1O70400 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim1O70400 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim1O70400 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.45□□□□□ -0.1
Pdlim1O70400 Gm26308-201ENSMUST00000157768 69 ntBASIC14.45□□□□□ -0.1
Pdlim1O70400 Gm37230-201ENSMUST00000194491 818 ntBASIC14.45□□□□□ -0.1
Pdlim1O70400 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim1O70400 Gm43125-201ENSMUST00000201724 730 ntBASIC14.45□□□□□ -0.1
Pdlim1O70400 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms