Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.45■□□□□ 0.38
Smarce1O54941 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.45■□□□□ 0.38
Smarce1O54941 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.45■□□□□ 0.38
Smarce1O54941 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Smarce1O54941 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.45■□□□□ 0.38
Smarce1O54941 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Smarce1O54941 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Smarce1O54941 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Smarce1O54941 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smarce1O54941 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.44■□□□□ 0.38
Smarce1O54941 Gm8749-201ENSMUST00000117737 331 ntBASIC17.44■□□□□ 0.38
Smarce1O54941 Gm9103-201ENSMUST00000119371 405 ntBASIC17.44■□□□□ 0.38
Smarce1O54941 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.44■□□□□ 0.38
Smarce1O54941 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.44■□□□□ 0.38
Smarce1O54941 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Smarce1O54941 Gm9726-201ENSMUST00000180321 678 ntBASIC17.44■□□□□ 0.38
Smarce1O54941 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Gm21362-201ENSMUST00000194272 928 ntBASIC17.44■□□□□ 0.38
Smarce1O54941 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.44■□□□□ 0.38
Smarce1O54941 AV026068-213ENSMUST00000223675 1171 ntBASIC17.44■□□□□ 0.38
Smarce1O54941 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.44■□□□□ 0.38
Smarce1O54941 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Smarce1O54941 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.44■□□□□ 0.38
Smarce1O54941 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.44■□□□□ 0.38
Smarce1O54941 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Smarce1O54941 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarce1O54941 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.44■□□□□ 0.38
Smarce1O54941 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.43■□□□□ 0.38
Smarce1O54941 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Gm24589-201ENSMUST00000116692 94 ntBASIC17.43■□□□□ 0.38
Smarce1O54941 Gm7862-201ENSMUST00000121461 292 ntBASIC17.43■□□□□ 0.38
Smarce1O54941 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smarce1O54941 Gm4899-201ENSMUST00000178708 719 ntBASIC17.43■□□□□ 0.38
Smarce1O54941 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
Smarce1O54941 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Smarce1O54941 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.43■□□□□ 0.38
Smarce1O54941 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Smarce1O54941 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.43■□□□□ 0.38
Smarce1O54941 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarce1O54941 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Smarce1O54941 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarce1O54941 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.42■□□□□ 0.38
Smarce1O54941 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarce1O54941 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarce1O54941 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Smarce1O54941 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarce1O54941 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms