Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Slc1a4O35874 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.23■□□□□ 0.35
Slc1a4O35874 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc1a4O35874 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Slc1a4O35874 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.23■□□□□ 0.35
Slc1a4O35874 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.22■□□□□ 0.35
Slc1a4O35874 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.22■□□□□ 0.35
Slc1a4O35874 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Slc1a4O35874 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Gm8749-201ENSMUST00000117737 331 ntBASIC17.22■□□□□ 0.35
Slc1a4O35874 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.22■□□□□ 0.35
Slc1a4O35874 Gm25948-201ENSMUST00000175334 112 ntBASIC17.22■□□□□ 0.35
Slc1a4O35874 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.22■□□□□ 0.35
Slc1a4O35874 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.22■□□□□ 0.35
Slc1a4O35874 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Slc1a4O35874 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a4O35874 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Slc1a4O35874 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.21■□□□□ 0.35
Slc1a4O35874 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Slc1a4O35874 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Slc1a4O35874 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Slc1a4O35874 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Slc1a4O35874 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Slc1a4O35874 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Slc1a4O35874 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.21■□□□□ 0.35
Slc1a4O35874 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.21■□□□□ 0.35
Slc1a4O35874 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.21■□□□□ 0.35
Slc1a4O35874 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.21■□□□□ 0.35
Slc1a4O35874 Gm2451-201ENSMUST00000199447 999 ntBASIC17.21■□□□□ 0.35
Slc1a4O35874 Gm10290-201ENSMUST00000200451 999 ntBASIC17.21■□□□□ 0.35
Slc1a4O35874 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.21■□□□□ 0.35
Slc1a4O35874 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.21■□□□□ 0.35
Slc1a4O35874 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Slc1a4O35874 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Slc1a4O35874 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Slc1a4O35874 Efs-202ENSMUST00000227037 2540 ntBASIC17.21■□□□□ 0.35
Slc1a4O35874 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a4O35874 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a4O35874 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a4O35874 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a4O35874 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a4O35874 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a4O35874 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a4O35874 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Slc1a4O35874 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Slc1a4O35874 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a4O35874 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a4O35874 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a4O35874 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.2■□□□□ 0.34
Slc1a4O35874 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a4O35874 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a4O35874 Gm15920-201ENSMUST00000118998 402 ntBASIC17.2■□□□□ 0.34
Slc1a4O35874 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a4O35874 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Slc1a4O35874 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a4O35874 Gm9824-201ENSMUST00000178707 561 ntBASIC17.2■□□□□ 0.34
Slc1a4O35874 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.2■□□□□ 0.34
Slc1a4O35874 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms