Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Nr1i3O35627 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nr1i3O35627 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.77■□□□□ 0.11
Nr1i3O35627 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nr1i3O35627 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.77■□□□□ 0.11
Nr1i3O35627 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Nr1i3O35627 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Nr1i3O35627 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nr1i3O35627 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Nr1i3O35627 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nr1i3O35627 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nr1i3O35627 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Nr1i3O35627 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 Gm12350-201ENSMUST00000121208 462 ntBASIC15.76■□□□□ 0.11
Nr1i3O35627 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Nr1i3O35627 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.76■□□□□ 0.11
Nr1i3O35627 Gm9182-201ENSMUST00000217829 639 ntBASIC15.76■□□□□ 0.11
Nr1i3O35627 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Nr1i3O35627 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Nr1i3O35627 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.76■□□□□ 0.11
Nr1i3O35627 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Nr1i3O35627 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.76■□□□□ 0.11
Nr1i3O35627 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nr1i3O35627 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.75■□□□□ 0.11
Nr1i3O35627 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
Nr1i3O35627 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Nr1i3O35627 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Nr1i3O35627 Gm16198-201ENSMUST00000118766 670 ntBASIC15.75■□□□□ 0.11
Nr1i3O35627 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.75■□□□□ 0.11
Nr1i3O35627 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.75■□□□□ 0.11
Nr1i3O35627 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.75■□□□□ 0.11
Nr1i3O35627 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.75■□□□□ 0.11
Nr1i3O35627 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nr1i3O35627 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.74■□□□□ 0.11
Nr1i3O35627 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.74■□□□□ 0.11
Nr1i3O35627 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.74■□□□□ 0.11
Nr1i3O35627 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.74■□□□□ 0.11
Nr1i3O35627 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.74■□□□□ 0.11
Nr1i3O35627 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Nr1i3O35627 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Nr1i3O35627 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nr1i3O35627 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Nr1i3O35627 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms