Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC18.61■□□□□ 0.57
Col15a1O35206 Gm6283-201ENSMUST00000182369 1000 ntBASIC18.61■□□□□ 0.57
Col15a1O35206 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col15a1O35206 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col15a1O35206 AY702102-202ENSMUST00000194651 1173 ntBASIC18.61■□□□□ 0.57
Col15a1O35206 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC18.61■□□□□ 0.57
Col15a1O35206 Gm17795-201ENSMUST00000214505 757 ntBASIC18.61■□□□□ 0.57
Col15a1O35206 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col15a1O35206 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col15a1O35206 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col15a1O35206 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col15a1O35206 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col15a1O35206 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Col15a1O35206 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col15a1O35206 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col15a1O35206 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col15a1O35206 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col15a1O35206 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col15a1O35206 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col15a1O35206 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col15a1O35206 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col15a1O35206 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Col15a1O35206 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col15a1O35206 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Col15a1O35206 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Col15a1O35206 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col15a1O35206 Gm15240-201ENSMUST00000118156 720 ntBASIC18.6■□□□□ 0.57
Col15a1O35206 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC18.6■□□□□ 0.57
Col15a1O35206 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col15a1O35206 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col15a1O35206 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Col15a1O35206 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Col15a1O35206 AC153962.4-201ENSMUST00000217878 242 ntBASIC18.6■□□□□ 0.57
Col15a1O35206 Gm7446-201ENSMUST00000221035 1240 ntBASIC18.6■□□□□ 0.57
Col15a1O35206 AC156560.2-201ENSMUST00000221232 264 ntBASIC18.6■□□□□ 0.57
Col15a1O35206 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.6■□□□□ 0.57
Col15a1O35206 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col15a1O35206 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col15a1O35206 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col15a1O35206 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col15a1O35206 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col15a1O35206 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col15a1O35206 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col15a1O35206 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col15a1O35206 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Col15a1O35206 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Col15a1O35206 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Col15a1O35206 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col15a1O35206 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Col15a1O35206 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col15a1O35206 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col15a1O35206 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col15a1O35206 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.58■□□□□ 0.57
Col15a1O35206 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col15a1O35206 Gm5303-201ENSMUST00000117943 1252 ntBASIC18.58■□□□□ 0.57
Col15a1O35206 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col15a1O35206 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Col15a1O35206 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col15a1O35206 Gm27892-201ENSMUST00000185017 106 ntBASIC18.58■□□□□ 0.57
Col15a1O35206 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Col15a1O35206 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col15a1O35206 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Col15a1O35206 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col15a1O35206 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col15a1O35206 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Col15a1O35206 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col15a1O35206 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col15a1O35206 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.58■□□□□ 0.56
Col15a1O35206 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col15a1O35206 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col15a1O35206 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Col15a1O35206 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col15a1O35206 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col15a1O35206 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col15a1O35206 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col15a1O35206 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.57■□□□□ 0.56
Col15a1O35206 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col15a1O35206 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC18.57■□□□□ 0.56
Col15a1O35206 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col15a1O35206 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Col15a1O35206 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col15a1O35206 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col15a1O35206 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col15a1O35206 AC131068.2-201ENSMUST00000226175 1453 ntBASIC18.57■□□□□ 0.56
Col15a1O35206 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms