Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.01□□□□□ -0.01
Ercc2O08811 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ercc2O08811 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
Ercc2O08811 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.01□□□□□ -0.01
Ercc2O08811 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.01□□□□□ -0.01
Ercc2O08811 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.01□□□□□ -0.01
Ercc2O08811 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.01□□□□□ -0.01
Ercc2O08811 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.01□□□□□ -0.01
Ercc2O08811 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.01□□□□□ -0.01
Ercc2O08811 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.01□□□□□ -0.01
Ercc2O08811 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc2O08811 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Ercc2O08811 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ercc2O08811 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15□□□□□ -0.01
Ercc2O08811 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15□□□□□ -0.01
Ercc2O08811 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Gm5479-201ENSMUST00000160578 435 ntBASIC15□□□□□ -0.01
Ercc2O08811 Gm27920-201ENSMUST00000183953 96 ntBASIC15□□□□□ -0.01
Ercc2O08811 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ercc2O08811 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15□□□□□ -0.01
Ercc2O08811 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Ercc2O08811 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc2O08811 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ercc2O08811 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ercc2O08811 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ercc2O08811 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ercc2O08811 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ercc2O08811 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.99□□□□□ -0.01
Ercc2O08811 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ercc2O08811 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Ercc2O08811 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.99□□□□□ -0.01
Ercc2O08811 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc2O08811 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ercc2O08811 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Ercc2O08811 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Ercc2O08811 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms