Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm10553J3QPF1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm10553J3QPF1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Gm10553J3QPF1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm10553J3QPF1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm10553J3QPF1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.22□□□□□ -0.61
Gm10553J3QPF1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm10553J3QPF1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm10553J3QPF1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm10553J3QPF1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Gm18889-201ENSMUST00000174284 929 ntBASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm10553J3QPF1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gm10553J3QPF1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gm10553J3QPF1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Gm10553J3QPF1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Gm10553J3QPF1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gm10553J3QPF1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gm10553J3QPF1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.62
Gm10553J3QPF1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gm10553J3QPF1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gm10553J3QPF1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.21□□□□□ -0.62
Gm10553J3QPF1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.21□□□□□ -0.62
Gm10553J3QPF1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Gm11543-201ENSMUST00000120758 370 ntBASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.2□□□□□ -0.62
Gm10553J3QPF1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10553J3QPF1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10553J3QPF1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10553J3QPF1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10553J3QPF1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10553J3QPF1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10553J3QPF1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10553J3QPF1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10553J3QPF1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10553J3QPF1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10553J3QPF1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10553J3QPF1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Gm10553J3QPF1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10553J3QPF1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10553J3QPF1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Gm10553J3QPF1 Gm14701-201ENSMUST00000117156 348 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms