Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Gm15483-201ENSMUST00000120338 456 ntBASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Gm17271-201ENSMUST00000165535 355 ntBASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Gm5264-201ENSMUST00000190584 848 ntBASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Olfr286-202ENSMUST00000205305 969 ntBASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Gm10175-201ENSMUST00000086013 645 ntBASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-3J3QMG8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Gm8000-201ENSMUST00000188378 592 ntBASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Gm20553-201ENSMUST00000204205 844 ntBASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms