Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Gm27847-201ENSMUST00000183711 107 ntBASIC13.76□□□□□ -0.21
Colca2F8VPY8 Gm27375-201ENSMUST00000183799 107 ntBASIC13.76□□□□□ -0.21
Colca2F8VPY8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Gm19078-201ENSMUST00000206311 727 ntBASIC13.76□□□□□ -0.21
Colca2F8VPY8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Gm9257-201ENSMUST00000221254 232 ntBASIC13.76□□□□□ -0.21
Colca2F8VPY8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.76□□□□□ -0.21
Colca2F8VPY8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.76□□□□□ -0.21
Colca2F8VPY8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Colca2F8VPY8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Colca2F8VPY8 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Gm12928-201ENSMUST00000117115 573 ntBASIC13.75□□□□□ -0.21
Colca2F8VPY8 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Gm29127-201ENSMUST00000188304 517 ntBASIC13.75□□□□□ -0.21
Colca2F8VPY8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Gm6091-201ENSMUST00000098307 165 ntBASIC13.75□□□□□ -0.21
Colca2F8VPY8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Colca2F8VPY8 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.74□□□□□ -0.21
Colca2F8VPY8 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.74□□□□□ -0.21
Colca2F8VPY8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.74□□□□□ -0.21
Colca2F8VPY8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Colca2F8VPY8 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.73□□□□□ -0.21
Colca2F8VPY8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Colca2F8VPY8 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.73□□□□□ -0.21
Colca2F8VPY8 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.73□□□□□ -0.21
Colca2F8VPY8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms