Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Gm11543-201ENSMUST00000120758 370 ntBASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap99A0A140LIX9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Gm15693-201ENSMUST00000120470 637 ntBASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Gm5745-201ENSMUST00000183748 313 ntBASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Cfap99A0A140LIX9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Gm23547-201ENSMUST00000158210 271 ntBASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Gm27437-201ENSMUST00000183429 107 ntBASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap99A0A140LIX9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.52■□□□□ 0.4
Cfap99A0A140LIX9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cfap99A0A140LIX9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cfap99A0A140LIX9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cfap99A0A140LIX9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cfap99A0A140LIX9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cfap99A0A140LIX9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.52■□□□□ 0.39
Cfap99A0A140LIX9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cfap99A0A140LIX9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.51■□□□□ 0.39
Cfap99A0A140LIX9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms