Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20bQ9Z104 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Gm20553-201ENSMUST00000204205 844 ntBASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20bQ9Z104 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Gm37230-201ENSMUST00000194491 818 ntBASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Gm45612-201ENSMUST00000211320 160 ntBASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20bQ9Z104 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Gm6973-201ENSMUST00000117080 721 ntBASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Gm11025-201ENSMUST00000140773 466 ntBASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Gm5264-201ENSMUST00000190584 848 ntBASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20bQ9Z104 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmg20bQ9Z104 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmg20bQ9Z104 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmg20bQ9Z104 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms