Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Gm12260-201ENSMUST00000122447 411 ntBASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Gm6443-201ENSMUST00000203599 874 ntBASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ClcnkaQ9WUB7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 AW822252-206ENSMUST00000208904 237 ntBASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClcnkaQ9WUB7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClcnkaQ9WUB7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClcnkaQ9WUB7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
ClcnkaQ9WUB7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClcnkaQ9WUB7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClcnkaQ9WUB7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClcnkaQ9WUB7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
ClcnkaQ9WUB7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClcnkaQ9WUB7 Rubie-203ENSMUST00000227803 2430 ntBASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms