Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim39Q9ESN2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim39Q9ESN2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.77□□□□□ -0.2
Trim39Q9ESN2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trim39Q9ESN2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trim39Q9ESN2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim39Q9ESN2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.77□□□□□ -0.2
Trim39Q9ESN2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Gm7862-201ENSMUST00000121461 292 ntBASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim39Q9ESN2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Gm7222-201ENSMUST00000117512 906 ntBASIC13.76□□□□□ -0.21
Trim39Q9ESN2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms