Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Gm4459-201ENSMUST00000118750 468 ntBASIC13.53□□□□□ -0.24
Dap3Q9ER88 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.53□□□□□ -0.24
Dap3Q9ER88 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dap3Q9ER88 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.53□□□□□ -0.24
Dap3Q9ER88 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dap3Q9ER88 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.53□□□□□ -0.24
Dap3Q9ER88 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dap3Q9ER88 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Dap3Q9ER88 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dap3Q9ER88 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Dap3Q9ER88 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dap3Q9ER88 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Dap3Q9ER88 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Dap3Q9ER88 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.52□□□□□ -0.25
Dap3Q9ER88 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.52□□□□□ -0.25
Dap3Q9ER88 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.52□□□□□ -0.25
Dap3Q9ER88 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.52□□□□□ -0.25
Dap3Q9ER88 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.52□□□□□ -0.25
Dap3Q9ER88 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dap3Q9ER88 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.51□□□□□ -0.25
Dap3Q9ER88 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.51□□□□□ -0.25
Dap3Q9ER88 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.51□□□□□ -0.25
Dap3Q9ER88 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dap3Q9ER88 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.5□□□□□ -0.25
Dap3Q9ER88 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dap3Q9ER88 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.5□□□□□ -0.25
Dap3Q9ER88 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms