Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Gm5763-201ENSMUST00000155951 1530 ntBASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Gm15198-201ENSMUST00000117283 177 ntBASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Gm15460-201ENSMUST00000118147 391 ntBASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Mir1894-201ENSMUST00000122802 81 ntBASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Gm17794-201ENSMUST00000220252 955 ntBASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-4Q9EQM3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-4Q9EQM3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Gm37424-201ENSMUST00000191727 561 ntBASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Gm37230-201ENSMUST00000194491 818 ntBASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Gm9182-201ENSMUST00000217829 639 ntBASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Gm9257-201ENSMUST00000221254 232 ntBASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms