Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4cQ9D7F7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp4cQ9D7F7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp4cQ9D7F7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp4cQ9D7F7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp4cQ9D7F7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp4cQ9D7F7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.58■□□□□ 0.41
Chmp4cQ9D7F7 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp4cQ9D7F7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4cQ9D7F7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4cQ9D7F7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4cQ9D7F7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.58■□□□□ 0.4
Chmp4cQ9D7F7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4cQ9D7F7 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.58■□□□□ 0.4
Chmp4cQ9D7F7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Chmp4cQ9D7F7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4cQ9D7F7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4cQ9D7F7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4cQ9D7F7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Chmp4cQ9D7F7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4cQ9D7F7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4cQ9D7F7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4cQ9D7F7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Gm28659-201ENSMUST00000188013 759 ntBASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Gm43767-201ENSMUST00000198933 381 ntBASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4cQ9D7F7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Gm7787-201ENSMUST00000216858 688 ntBASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chmp4cQ9D7F7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms