Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Q9CYI0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Q9CYI0 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.24■□□□□ 0.19
Q9CYI0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Q9CYI0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Q9CYI0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Q9CYI0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Q9CYI0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Q9CYI0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.23■□□□□ 0.19
Q9CYI0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Q9CYI0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Q9CYI0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.23■□□□□ 0.19
Q9CYI0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Q9CYI0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Q9CYI0 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.23■□□□□ 0.19
Q9CYI0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.23■□□□□ 0.19
Q9CYI0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.23■□□□□ 0.19
Q9CYI0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.23■□□□□ 0.19
Q9CYI0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Q9CYI0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.22■□□□□ 0.19
Q9CYI0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Q9CYI0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Q9CYI0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Q9CYI0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.22■□□□□ 0.19
Q9CYI0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Gm8749-201ENSMUST00000117737 331 ntBASIC16.22■□□□□ 0.19
Q9CYI0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Q9CYI0 Gm27920-201ENSMUST00000183953 96 ntBASIC16.22■□□□□ 0.19
Q9CYI0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.22■□□□□ 0.19
Q9CYI0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.22■□□□□ 0.19
Q9CYI0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.22■□□□□ 0.19
Q9CYI0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Q9CYI0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Q9CYI0 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.22■□□□□ 0.19
Q9CYI0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.22■□□□□ 0.19
Q9CYI0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
Q9CYI0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Q9CYI0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Q9CYI0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Q9CYI0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Q9CYI0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Q9CYI0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Q9CYI0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Q9CYI0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Q9CYI0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Q9CYI0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Q9CYI0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Q9CYI0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.21■□□□□ 0.19
Q9CYI0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.21■□□□□ 0.19
Q9CYI0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Q9CYI0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Q9CYI0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Q9CYI0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Q9CYI0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Q9CYI0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Q9CYI0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Q9CYI0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Q9CYI0 Gm13464-201ENSMUST00000119418 935 ntBASIC16.21■□□□□ 0.19
Q9CYI0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.21■□□□□ 0.19
Q9CYI0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Q9CYI0 Gm27622-201ENSMUST00000183779 60 ntBASIC16.21■□□□□ 0.19
Q9CYI0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Q9CYI0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms