Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Gm2651-201ENSMUST00000203560 838 ntBASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf111Q99ML9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Matn2-206ENSMUST00000228570 2798 ntBASIC14.27□□□□□ -0.13
Rnf111Q99ML9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Gm13036-201ENSMUST00000117799 748 ntBASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.26□□□□□ -0.13
Rnf111Q99ML9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.26□□□□□ -0.13
Rnf111Q99ML9 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf111Q99ML9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf111Q99ML9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf111Q99ML9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf111Q99ML9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf111Q99ML9 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.24□□□□□ -0.13
Rnf111Q99ML9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf111Q99ML9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf111Q99ML9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf111Q99ML9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf111Q99ML9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms