Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.67□□□□□ -0.22
Cdca3Q99M54 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.66□□□□□ -0.22
Cdca3Q99M54 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cdca3Q99M54 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Gm17968-201ENSMUST00000194902 784 ntBASIC13.66□□□□□ -0.22
Cdca3Q99M54 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdca3Q99M54 Grk6-207ENSMUST00000225925 2769 ntBASIC13.66□□□□□ -0.22
Cdca3Q99M54 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.66□□□□□ -0.22
Cdca3Q99M54 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Gm8318-201ENSMUST00000182954 872 ntBASIC13.65□□□□□ -0.22
Cdca3Q99M54 Mir7023-201ENSMUST00000185093 64 ntBASIC13.65□□□□□ -0.22
Cdca3Q99M54 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Gm9682-201ENSMUST00000197505 556 ntBASIC13.65□□□□□ -0.22
Cdca3Q99M54 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Gm42790-201ENSMUST00000201268 969 ntBASIC13.65□□□□□ -0.22
Cdca3Q99M54 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdca3Q99M54 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cdca3Q99M54 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.64□□□□□ -0.23
Cdca3Q99M54 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.64□□□□□ -0.23
Cdca3Q99M54 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Gm13365-201ENSMUST00000121188 973 ntBASIC13.64□□□□□ -0.23
Cdca3Q99M54 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdca3Q99M54 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.64□□□□□ -0.23
Cdca3Q99M54 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.64□□□□□ -0.23
Cdca3Q99M54 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdca3Q99M54 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms