Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 AC092183.1-201ENST00000469884 875 ntBASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 NUS1P2-201ENST00000417358 873 ntBASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 KRT18P58-201ENST00000527480 1120 ntBASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 AL390719.2-201ENST00000606993 987 ntBASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 REXO1L6P-202ENST00000619970 1078 ntBASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 TP73-AS1-207ENST00000624167 988 ntBASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 AD000864.1-201ENST00000624076 2295 ntBASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPGRIP1Q96KN7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 IGHV3-47-201ENST00000425060 335 ntBASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 POLD2P1-201ENST00000511220 997 ntBASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms