Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col20a1Q923P0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Gm45453-201ENSMUST00000211758 853 ntBASIC17.3■□□□□ 0.36
Col20a1Q923P0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col20a1Q923P0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Col20a1Q923P0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.29■□□□□ 0.36
Col20a1Q923P0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col20a1Q923P0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Col20a1Q923P0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.28■□□□□ 0.36
Col20a1Q923P0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.28■□□□□ 0.36
Col20a1Q923P0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.28■□□□□ 0.36
Col20a1Q923P0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Col20a1Q923P0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.28■□□□□ 0.36
Col20a1Q923P0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Col20a1Q923P0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col20a1Q923P0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col20a1Q923P0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col20a1Q923P0 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.27■□□□□ 0.36
Col20a1Q923P0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.27■□□□□ 0.36
Col20a1Q923P0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.27■□□□□ 0.36
Col20a1Q923P0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms