Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.38■□□□□ 0.05
Pcdha3Q91Y16 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Gm5867-201ENSMUST00000063197 592 ntBASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha3Q91Y16 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Mir1895-201ENSMUST00000122615 79 ntBASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Gm45612-201ENSMUST00000211320 160 ntBASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Pcdha3Q91Y16 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Gm11025-201ENSMUST00000140773 466 ntBASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Gm27494-201ENSMUST00000184735 189 ntBASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdha3Q91Y16 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms