Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb2Q91Y00 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Gm27920-201ENSMUST00000183953 96 ntBASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Gm38225-201ENSMUST00000194001 393 ntBASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Gm8396-201ENSMUST00000057361 823 ntBASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb2Q91Y00 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb2Q91Y00 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb2Q91Y00 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb2Q91Y00 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.58■□□□□ 0.09
Pcdhb2Q91Y00 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb2Q91Y00 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 Gm5312-201ENSMUST00000203728 547 ntBASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhb2Q91Y00 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb2Q91Y00 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms