Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Gm15483-201ENSMUST00000120338 456 ntBASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Gm6443-201ENSMUST00000203599 874 ntBASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb6Q91XZ4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb6Q91XZ4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb6Q91XZ4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb6Q91XZ4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Gm5479-201ENSMUST00000160578 435 ntBASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb6Q91XZ4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb6Q91XZ4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Gm37230-201ENSMUST00000194491 818 ntBASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Gm45098-201ENSMUST00000207179 657 ntBASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb6Q91XZ4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms