Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rpa1Q8VEE4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Rpa1Q8VEE4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Rpa1Q8VEE4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rpa1Q8VEE4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Rpa1Q8VEE4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rpa1Q8VEE4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Gm25745-201ENSMUST00000174945 133 ntBASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rpa1Q8VEE4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpa1Q8VEE4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpa1Q8VEE4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms