Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Gm44335-201ENSMUST00000196879 141 ntBASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Gm44297-201ENSMUST00000198304 141 ntBASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Gm44346-201ENSMUST00000198851 141 ntBASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Rprd1aQ8VDS4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.13■□□□□ 0.01
Rprd1aQ8VDS4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Mir6990-201ENSMUST00000183724 91 ntBASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rprd1aQ8VDS4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.11■□□□□ 0.01
Rprd1aQ8VDS4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms