Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdt1Q8R4E9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdt1Q8R4E9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdt1Q8R4E9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdt1Q8R4E9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdt1Q8R4E9 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.25□□□□□ -0.13
Cdt1Q8R4E9 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.25□□□□□ -0.13
Cdt1Q8R4E9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdt1Q8R4E9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdt1Q8R4E9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.25□□□□□ -0.13
Cdt1Q8R4E9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdt1Q8R4E9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdt1Q8R4E9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Cdt1Q8R4E9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cdt1Q8R4E9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Gm12008-201ENSMUST00000117791 755 ntBASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Gm18889-201ENSMUST00000174284 929 ntBASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Gm43125-201ENSMUST00000201724 730 ntBASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdt1Q8R4E9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdt1Q8R4E9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdt1Q8R4E9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdt1Q8R4E9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdt1Q8R4E9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdt1Q8R4E9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cdt1Q8R4E9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdt1Q8R4E9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdt1Q8R4E9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdt1Q8R4E9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cdt1Q8R4E9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdt1Q8R4E9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms