Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Mir125a-201ENSMUST00000083545 68 ntBASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Chmp7Q8R1T1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Gm14928-201ENSMUST00000120198 477 ntBASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Gm12490-201ENSMUST00000120255 560 ntBASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp7Q8R1T1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Chmp7Q8R1T1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Gm9522-201ENSMUST00000182394 926 ntBASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Gm28631-201ENSMUST00000190740 334 ntBASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp7Q8R1T1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp7Q8R1T1 Gm22189-201ENSMUST00000103822 86 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms